produces a figure summarizing alpha and beta diversity on scatterplots

Source: R/scatter_alphabeta.R

produces a figure summarizing alpha and beta diversity on scatterplots

scatter_alphabeta(
  alpha,
  PCoA_1,
  PCoA_2,
  PCoA_3,
  classes,
  filename = NULL,
  palette = "Set1"
)

Arguments

alpha

numeric. alpha diversity estimated

PCoA_1

numeric. first component obtained from PCoA

PCoA_2

numeric. second component obtained from PCoA

PCoA_3

numeric. third component obtained from PCoA

classes

character. classes of vegetation types/species communities

filename

character. path where to save figure

palette

character. palette to be used. –> either name for a palette in RColorBrewer::brewer.pal or set of colors

Value

none